Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015905804.1_cds_XP_016456077.1_49947
CDS Infomation	[gene=LOC107780070] [db_xref=GeneID:107780070] [protein=protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X3] [protein_id=XP_016456077.1] [location=complement(join(22729..23149,23795..24330,25570..26329,33475..33539,33659..33723,34038..37380,37455..37517,37663..37731,37923..37973,38470..38604,38693..38760,38844..38915,39129..39177))] [gbkey=CDS]
Sequence	ATGGATCTACCTCTTGAGGAGCTTCTTAAGCATTATGCAGTTGGGGAAGCTAGCAGAGAT TGTAGCCCAGAGAAGAGTGGTGCAGATGTTACGGTCAGTTCTGGCGAGGACAGTGATAAA TGTAGAGATGATGATGTTGCTATTGAGACCAACGGGGGCTGCTCACCTGCCATTTCTGGT CGTCGTTCTGTTGAAAGTAATGGCGTCTTATCAGTACCAAATAACCAGTATCCTGACCTA GGACAAAACAAGCTAAAAATTCCTCCAAAGAAGTATCAAGAGTTAGACAAAGTTAATTTG TTAGGTGTCTTTAATGATGAACAGGATGATGATGATTATGTCCTTGCTCTTGGTGAAAAT AAAGAATGCAATATGGATGATGAAACAACTTTGTTAGAGGAGGAAGAATTGGCAAAGGCA GAGCCGAATGATGCTGCAGATGAGATTGCACTGTTGCAAAAGGAGAGCGAACTTCCTTTA GATGAGCTCCTTGCTAGGTATAAAGAGGATTATGATAGTGATGAAAATGTGGGGGATGAT TCTGAATCATATGCGTCTGCTTCAACAGCACAGAATGTATCTGAACTGAGTCAAGTAAAT GATGGACTGAGTGATGTACTGCCCACTACAGTCGCTGAGACAGAAGAAAGGGAAGTTGAA AGCATGGATAAAACAGGGGAAGAAAGGCAGAGTGAGAATTTTTCAGAATCACCAGCAAAA AATGAATCTGAACCCAATCAAGTAAATGATGGACCGAACGATTTACTGCCCACTACAGTC ACCGAGACTGAAGAAAAGGAAGTTCGAAGCATGGATAAAACAGTGGAAGAAAGGCAGGGG GAGGATTTTTCAGAATCGCCAGCAAAAAATGAATCTGAACCCAGTCAAGTAAATGATGGA CCGAGCGATGTACTGCCCGCTACGGTCACTGAGACAGAAGAAAAGGAAGTTGGAAGCATG GATAAAACAGGGGAAGAAAGGCAAAGTGATGATATAATTGCTGATGCAGCAGCTGCTGCC AGATCAGCACAACCAACAGGTAACACCTTCTCAACAACCAAAGTGCGGACTAAGTTCCCC TTCCTTCTAAAATTTCCCCTTCGTGAGTATCAACATATTGGTTTGGACTGGCTTGTAACC ATGTATGAGAAGAAACTTAATGGGATCCTAGCAGATGAAATGGGTTTGGGGAAGACTATC ATGACAATTGCTCTTCTTGCTCACCTAGCATGTGAAAAAGGAATATGGGGCCCTCATCTT ATTGTTGTCCCAACTAGTGTCATGCTAAACTGGGAGACTGAGTTTCTTAGATGGTGTCCT GCTTTCAAAATTTTGACATATTTTGGCAGTGCAAAAGAGCGAAAGATTAAAAGGCAAGGT TGGTTGAAGCCAAACTCGTTTCATATATGTATCACAACTTACAGACTTGTTATACAGGAC TCCAAAGTTTTCAAGCGTAAGAAGTGGAAGTACTTGATTTTAGATGAAGCTCATCTAATA AAGAATTGGAAATCGCAAAGATGGCAAACACTTCTCAATTTTAACTCAAAACGGCGTATT CTTTTGACTGGTACACCATTGCAGAATGATCTCATGGAGCTGTGGTCTCTAATGCATTTC TTGATGCCTCATATTTTTCAATCTCACCAGGAATTCAAAGATTGGTTCTGTAATCCTATA TCTGGAATGGTTGAGGGACAAGAAAAGGTTAATAAGGAAGTTGTTGATCGCTTGCATAAT GTCCTTCGTCCCTTTATTCTCCGCCGGTTGAAGAGGGATGTGGAGAAGCAGCTTCCTTCA AAACATGAGCACGTCATTTATTGTAAGCTATCAAGGAGGCAGCGTAACTTGTATGAAGAC TTTATTGCCAGTTCGGAGACACAAGCTACTCTTGCTAGTTCAAATTTTTTTGCAATGATA AGTGTTATAATGCAACTTCGCAAAGTGTGCAATCACCCTGATTTATTTGAAGGACGTCCA ATAGTGAGCTCCTTTGATATGAGTGGTATTGATATGCACTTGAGCTCTTCCATTTGCTCG ATTCTGTCACATGGTATCTTTTCATCTATCAACCTTGGGGCTTTGGGGCTGTTGTTTACA CATCTTGATTTTTCAATGACCTCTTGGGAGAGTCATGATGTTCAATCCATTGCTACCCCT TCAAGCTTGATTGAGGGTCGTGTGACTCAAATTCATGGTGAAGAAACTTCACTAGTACTT AAACGGAATAAGAAGTTTCATGGGACAAACATATTTGAAGAGATCCAAAAGGCACTCGTC GAGGAGAGGCTAAGAGAAGCAAAGGAGAGAGCGGCATCTGTTGCATGGTGGAATTCCATC AAGTGTAAGCGGAAACCTGTATATTCAACAAGTCTTCGGGAGATTGTTACTGTGAAACAT CCTGTTCACGGTATTTACTGTCAGAAAAGTAATCCCTTGTCATACCTGTACTCCTCTAGG CTTGCAGACTTGATACTGTCGCCAGTTGAGAGATTCCAAAAAATGGTTGATCAGGTTGAG ACTTTCATGTTTGCAATCCCTGCTGCACGTTCCCCAGCACCTGCTTGCTGGTGCAGTAAA CCAGGTACTTCCGTATTTTTTAGTCCAACCTTTAAGGAGAGATCTTCTAAGGTTCTCTCT CCGCTTCTCACTCCTTTTCGCCCAGCCATTGTTAGAAGGCAAGTCTACTTTCCAGATAGG CGGCTCATACAATTTGACTGTGGAAAGCTGCAGGAGCTTGCAGGTTTGTTGAGGCGATTA AAATCAGGAGGTCACCGTGCACTAATTTTCACCCAAATGACAAAGATGCTTGATGTTTTA GAAGCTTTCATTAATTTGTATGGTTACACTTACATGCGTCTGGATGGTTCTACTCTGCCC GAACAGAGACAAACTTTGATGCAACGGTTCAACACAAATCCAAAGATTTTCCTTTTTATT TTATCAACCCGCAGTGGTGGAGTTGGCATCAACTTGGTGGGGGCAGACACAGTCATCTTT TATGATAGCGACTGGAATCCAGCTATGGATCAACAAGCTCAAGATCGCTGTCATAGAATA GGCCAGACCCGTGAAGTACATATTTATCGATTGATAAGTGAGAGTACCATTGAAGAGAAT ATTTTGAAAAAAGCAAACCAGAAGCGAGCTCTGGATGATTTGGTTATACAGGGTGGAAGT TACAACACTGAATTCTTCAAGAAACTGGATCCAATGGAATTGTTCTCAGGCCACAGAACA GTTTCCTTAAAGAACATTGAAGGAGAGAAGAATAGCAATGTTACTGAGGTTCAGCTCTCT AATGCTGACGTGGAGGCTGCTCTGCAAAATGTAGAAGATGAGGCGGATTACATGGCTCTG AAGAAAGTTGAACAGGAAGAGGCAGTAGACAATCAGGAGTTCACTGAAGAAGCAGTTGGT AGGTTGGAAGAAGATGAACTTGGTAATGATGATGAGATGAAGGCTGATGAGCCTGCTGAT CATGAAGTCCCAGTTACAACATCAGGCAAAGAACTTGTGGCTATGTCAAATGCTAGTAAT CCATTAAAAGAACAAGCAATTACTTTTGCTGGTAAAGATGATGACATTGACATGTTGGCC GATGTCAAACAGATGGCAGCAGCTGCTGCTGCTGCAGGACAAGCTATCTTGTCTTTCGAG AGTCAGTTGCGTCCAATTGATCGATATGCTGTACGTTTTCTGGAGTTATGGGACCCTATC ATAGACAAGACAGCTATTGAATCACAAGGTCATTTTGAAGAAACTGAATGGGAATTGGAT AGAATTGAGAAATTGAAGGAAGATATGGAAGCAGAGATTGATGATGATGAAGAACCTTTA GTTTACGAAAGATGGGATGCTGATTTTGCGACTGAGGTATACAGACAGCAGGTGGAGGCT TTGGCTCAACATCAGTTGATGGAGGAACTTGAAGCTGAAGCTAAAGAGAAGGAGCTTGCA GAATATGAGAACTCGATGGGGCATGCTACAGCTTCTGTTCCAAAATCCAAGTCAAAGAAG AAGGCAAAGAAAACAAAGTTCAAATCTTTGAAGAAAGGAGGTCTAGCTTCTGAACCTCAA GCTTTAAAGGACGGGTCTTCGATAGAGTTGTTGCCCATAGATGATGATGTTCTATCTAGT GAGCCAGTTACAACGCCTGATTCTGCTCAAGAGAGAAAGCGTAGACTAGCAACGGGTGAT GAGGATGTGAAGAGCTCGAAGAAGTCTAAAAAATTGAAGAAGTCCTCTGAGGTATCTTCG CTGGTAATGCATTCAACTTACCATGGAAAGCGGCAGGTTGAATCTAAAGGATTGAAGCAG TATGATGGTGGCACCATGGATGCCGAACTCAGACCAATAAGCAGAAGCAAGATGGGAGGG AAAATCTCAATCAGTCCGATGCCTGTAAAGCGAGTTCTTACTATTAAATCAGAAAAGCCG ATTAGGAAAGGTAAAACGTGGTATAAAGATTATTTTCCATCCGCTGATTCATGGTTGCCA CAAGAGGACGCTGTACTTTGTGCTTCTGTTCATGAGTATGGTCCTCACTGGAGCTTGGTG AGTGATATCTTGTATGGAATGACTGCTGGCGGAGTTTATAGAGGAAGATATCGTCACCCT ATTCTTTGTTGCGAAAGGTTTAGGGAACTTATACAGAGATATGTGTTATCTACGACAGAC GGTGTAAATGATAGATCCACTAATGCTGGATCGATAAAAGGTCTTCTCAAAGTGACTGAG GAAAATGTCCGTCTGGTGTTAGATATTGCATCAGAGGTTCCAGATCATGAGCCTCTTGTT CAAAAGCATTTCTTTGCCCTTCTTTCCTCTGTGTGGAAGATGTCATGCCGGAAAAGCCAG ACAAATGCGTTCTCATCTTCCCAGAATGGCTTCTATCATTCTGGAAGTTTGTTTACACTG TTTACACCAACTATGAACCTTGGTTCCACGAATTACGCAACAGGACCACTGGAAAAGAGA TTTTCTAATTTAAGTATATGTGCCAAGTTAGTAGCAGCTGCTCTCTCTGACCAGCAGAGT GCACAAAGTGATGAGAGAGTCTCCATTTGTGACCAGAGAGAAGAAGCTTCTTTTCCTGCT GAGCAGTTGGATGTTACACTGGAATTTGGGGCAGAGAAAGATAATAAGATAATTCCCTTG CCATCTCCTGTAACTGTCAAAATACGTGGTCCTGAAACCCCATTGCATCCAGGAATGATG ATAGCTGAGCATCAACATTTCAAGTCTTCCCTGAATGTGGCTGAAAACCGGTTCTGGGCT GCGTCAAGTACTGAAAGTTGTTTGGATTGGGCTTCTCTTGCTTTTCCTGTTGGGGATGCC AAGTCACGAACTCCATTGACATCACAATTTTTGGGGAAGCACAAGCTCTCTGATTCTGTG AAGGTCTCCAAATCAAAGTCCAGAAAGATTCCAACAGAATCTAGTGATGTTGGTCGGACC AAGGATCTAGTAATCCTGCCAATGCCATCTGCATCTAATGATTCCTGTGCAAGAGCTGAT GTGGGATTATCGTTCCTCGCAGAAAGTGGACATGATTTTGAAGACAGGACCCTTTTTAAC CTAAATTCAGAATTTAACTTGGGGAGTGAGGATGTATTCCAACATGAATATGTTCCTGAC TTCATATCGGGACTTGACGATTGGTCAGTTTTTCCAGATTTCACGGATATCGGGTAG

Peptide Sequence

PEP ID	XP_016456077.1
PEP Infomation	PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X3 [Nicotiana tabacum]
Sequence	MDLPLEELLKHYAVGEASRDCSPEKSGADVTVSSGEDSDKCRDDDVAIETNGGCSPAISG RRSVESNGVLSVPNNQYPDLGQNKLKIPPKKYQELDKVNLLGVFNDEQDDDDYVLALGEN KECNMDDETTLLEEEELAKAEPNDAADEIALLQKESELPLDELLARYKEDYDSDENVGDD SESYASASTAQNVSELSQVNDGLSDVLPTTVAETEEREVESMDKTGEERQSENFSESPAK NESEPNQVNDGPNDLLPTTVTETEEKEVRSMDKTVEERQGEDFSESPAKNESEPSQVNDG PSDVLPATVTETEEKEVGSMDKTGEERQSDDIIADAAAAARSAQPTGNTFSTTKVRTKFP FLLKFPLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHL IVVPTSVMLNWETEFLRWCPAFKILTYFGSAKERKIKRQGWLKPNSFHICITTYRLVIQD SKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHF LMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVVDRLHNVLRPFILRRLKRDVEKQLPS KHEHVIYCKLSRRQRNLYEDFIASSETQATLASSNFFAMISVIMQLRKVCNHPDLFEGRP IVSSFDMSGIDMHLSSSICSILSHGIFSSINLGALGLLFTHLDFSMTSWESHDVQSIATP SSLIEGRVTQIHGEETSLVLKRNKKFHGTNIFEEIQKALVEERLREAKERAASVAWWNSI KCKRKPVYSTSLREIVTVKHPVHGIYCQKSNPLSYLYSSRLADLILSPVERFQKMVDQVE TFMFAIPAARSPAPACWCSKPGTSVFFSPTFKERSSKVLSPLLTPFRPAIVRRQVYFPDR RLIQFDCGKLQELAGLLRRLKSGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTLP EQRQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI GQTREVHIYRLISESTIEENILKKANQKRALDDLVIQGGSYNTEFFKKLDPMELFSGHRT VSLKNIEGEKNSNVTEVQLSNADVEAALQNVEDEADYMALKKVEQEEAVDNQEFTEEAVG RLEEDELGNDDEMKADEPADHEVPVTTSGKELVAMSNASNPLKEQAITFAGKDDDIDMLA DVKQMAAAAAAAGQAILSFESQLRPIDRYAVRFLELWDPIIDKTAIESQGHFEETEWELD RIEKLKEDMEAEIDDDEEPLVYERWDADFATEVYRQQVEALAQHQLMEELEAEAKEKELA EYENSMGHATASVPKSKSKKKAKKTKFKSLKKGGLASEPQALKDGSSIELLPIDDDVLSS EPVTTPDSAQERKRRLATGDEDVKSSKKSKKLKKSSEVSSLVMHSTYHGKRQVESKGLKQ YDGGTMDAELRPISRSKMGGKISISPMPVKRVLTIKSEKPIRKGKTWYKDYFPSADSWLP QEDAVLCASVHEYGPHWSLVSDILYGMTAGGVYRGRYRHPILCCERFRELIQRYVLSTTD GVNDRSTNAGSIKGLLKVTEENVRLVLDIASEVPDHEPLVQKHFFALLSSVWKMSCRKSQ TNAFSSSQNGFYHSGSLFTLFTPTMNLGSTNYATGPLEKRFSNLSICAKLVAAALSDQQS AQSDERVSICDQREEASFPAEQLDVTLEFGAEKDNKIIPLPSPVTVKIRGPETPLHPGMM IAEHQHFKSSLNVAENRFWAASSTESCLDWASLAFPVGDAKSRTPLTSQFLGKHKLSDSV KVSKSKSRKIPTESSDVGRTKDLVILPMPSASNDSCARADVGLSFLAESGHDFEDRTLFN LNSEFNLGSEDVFQHEYVPDFISGLDDWSVFPDFTDIG

Transcript Sequence

Gene sequence data has not been registered.